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Bayesian Inference and Learning in Gaussian Process State-Space Models with Particle MCMC

Neural Information Processing Systems

State-space models are successfully used in many areas of science, engineering and economics to model time series and dynamical systems. We present a fully Bayesian approach to inference and learning in nonlinear nonparametric state-space models. We place a Gaussian process prior over the transition dynamics, resulting in a flexible model able to capture complex dynamical phenomena. However, to enable efficient inference, we marginalize over the dynamics of the model and instead infer directly the joint smoothing distribution through the use of specially tailored Particle Markov Chain Monte Carlo samplers. Once an approximation of the smoothing distribution is computed, the state transition predictive distribution can be formulated analytically.


Efficient Transformed Gaussian Process State-Space Models for Non-Stationary High-Dimensional Dynamical Systems

arXiv.org Machine Learning

Gaussian process state-space models (GPSSMs) have emerged as a powerful framework for modeling dynamical systems, offering interpretable uncertainty quantification and inherent regularization. However, existing GPSSMs face significant challenges in handling high-dimensional, non-stationary systems due to computational inefficiencies, limited scalability, and restrictive stationarity assumptions. In this paper, we propose an efficient transformed Gaussian process state-space model (ETGPSSM) to address these limitations. Our approach leverages a single shared Gaussian process (GP) combined with normalizing flows and Bayesian neural networks, enabling efficient modeling of complex, high-dimensional state transitions while preserving scalability. To address the lack of closed-form expressions for the implicit process in the transformed GP, we follow its generative process and introduce an efficient variational inference algorithm, aided by the ensemble Kalman filter (EnKF), to enable computationally tractable learning and inference. Extensive empirical evaluations on synthetic and real-world datasets demonstrate the superior performance of our ETGPSSM in system dynamics learning, high-dimensional state estimation, and time-series forecasting, outperforming existing GPSSMs and neural network-based methods in both accuracy and computational efficiency.



Out of Distribution Detection via Domain-Informed Gaussian Process State Space Models

arXiv.org Artificial Intelligence

In order for robots to safely navigate in unseen scenarios using learning-based methods, it is important to accurately detect out-of-training-distribution (OoD) situations online. Recently, Gaussian process state-space models (GPSSMs) have proven useful to discriminate unexpected observations by comparing them against probabilistic predictions. However, the capability for the model to correctly distinguish between in- and out-of-training distribution observations hinges on the accuracy of these predictions, primarily affected by the class of functions the GPSSM kernel can represent. In this paper, we propose (i) a novel approach to embed existing domain knowledge in the kernel and (ii) an OoD online runtime monitor, based on receding-horizon predictions. Domain knowledge is provided in the form of a dataset, collected either in simulation or by using a nominal model. Numerical results show that the informed kernel yields better regression quality with smaller datasets, as compared to standard kernel choices. We demonstrate the effectiveness of the OoD monitor on a real quadruped navigating an indoor setting, which reliably classifies previously unseen terrains.


Towards Efficient Modeling and Inference in Multi-Dimensional Gaussian Process State-Space Models

arXiv.org Artificial Intelligence

The Gaussian process state-space model (GPSSM) has attracted extensive attention for modeling complex nonlinear dynamical systems. However, the existing GPSSM employs separate Gaussian processes (GPs) for each latent state dimension, leading to escalating computational complexity and parameter proliferation, thus posing challenges for modeling dynamical systems with high-dimensional latent states. To surmount this obstacle, we propose to integrate the efficient transformed Gaussian process (ETGP) into the GPSSM, which involves pushing a shared GP through multiple normalizing flows to efficiently model the transition function in high-dimensional latent state space. Additionally, we develop a corresponding variational inference algorithm that surpasses existing methods in terms of parameter count and computational complexity. Experimental results on diverse synthetic and real-world datasets corroborate the efficiency of the proposed method, while also demonstrating its ability to achieve similar inference performance compared to existing methods. Code is available at \url{https://github.com/zhidilin/gpssmProj}.


Free-Form Variational Inference for Gaussian Process State-Space Models

arXiv.org Artificial Intelligence

Gaussian process state-space models (GPSSMs) provide a principled and flexible approach to modeling the dynamics of a latent state, which is observed at discrete-time points via a likelihood model. However, inference in GPSSMs is computationally and statistically challenging due to the large number of latent variables in the model and the strong temporal dependencies between them. In this paper, we propose a new method for inference in Bayesian GPSSMs, which overcomes the drawbacks of previous approaches, namely over-simplified assumptions, and high computational requirements. Our method is based on free-form variational inference via stochastic gradient Hamiltonian Monte Carlo within the inducing-variable formalism. Furthermore, by exploiting our proposed variational distribution, we provide a collapsed extension of our method where the inducing variables are marginalized analytically. We also showcase results when combining our framework with particle MCMC methods. We show that, on six real-world datasets, our approach can learn transition dynamics and latent states more accurately than competing methods.


Bayesian Inference and Learning in Gaussian Process State-Space Models with Particle MCMC

Neural Information Processing Systems

State-space models are successfully used in many areas of science, engineering and economics to model time series and dynamical systems. We present a fully Bayesian approach to inference and learning in nonlinear nonparametric state-space models. We place a Gaussian process prior over the transition dynamics, resulting in a flexible model able to capture complex dynamical phenomena. However, to enable efficient inference, we marginalize over the dynamics of the model and instead infer directly the joint smoothing distribution through the use of specially tailored Particle Markov Chain Monte Carlo samplers. Once an approximation of the smoothing distribution is computed, the state transition predictive distribution can be formulated analytically.


Output-Dependent Gaussian Process State-Space Model

arXiv.org Artificial Intelligence

Gaussian process state-space model (GPSSM) is a fully probabilistic state-space model that has attracted much attention over the past decade. However, the outputs of the transition function in the existing GPSSMs are assumed to be independent, meaning that the GPSSMs cannot exploit the inductive biases between different outputs and lose certain model capacities. To address this issue, this paper proposes an output-dependent and more realistic GPSSM by utilizing the well-known, simple yet practical linear model of coregionalization (LMC) framework to represent the output dependency. To jointly learn the output-dependent GPSSM and infer the latent states, we propose a variational sparse GP-based learning method that only gently increases the computational complexity. Experiments on both synthetic and real datasets demonstrate the superiority of the output-dependent GPSSM in terms of learning and inference performance.


Bayesian Inference and Learning in Gaussian Process State-Space Models with Particle MCMC

Neural Information Processing Systems

State-space models are successfully used in many areas of science, engineering and economics to model time series and dynamical systems. We present a fully Bayesian approach to inference and learning in nonlinear nonparametric state-space models. We place a Gaussian process prior over the transition dynamics, resulting in a flexible model able to capture complex dynamical phenomena. However, to enable efficient inference, we marginalize over the dynamics of the model and instead infer directly the joint smoothing distribution through the use of specially tailored Particle Markov Chain Monte Carlo samplers. Once an approximation of the smoothing distribution is computed, the state transition predictive distribution can be formulated analytically.